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FlowKit API
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FlowKit
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Index
A
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B
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C
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D
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E
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F
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G
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H
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I
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L
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M
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P
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Q
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R
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S
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W
A
add_comp_matrix() (flowkit.GatingStrategy method)
(flowkit.Session method)
add_gate() (flowkit.GatingStrategy method)
(flowkit.Session method)
add_samples() (flowkit.Session method)
add_transform() (flowkit.GatingStrategy method)
(flowkit.Session method)
analyze_samples() (flowkit.Session method)
(flowkit.Workspace method)
apply() (flowkit.gates.BooleanGate method)
(flowkit.gates.EllipsoidGate method)
(flowkit.gates.PolygonGate method)
(flowkit.gates.QuadrantGate method)
(flowkit.gates.RectangleGate method)
(flowkit.Matrix method)
(flowkit.transforms.AsinhTransform method)
(flowkit.transforms.HyperlogTransform method)
(flowkit.transforms.LinearTransform method)
(flowkit.transforms.LogicleTransform method)
(flowkit.transforms.LogTransform method)
(flowkit.transforms.RatioTransform method)
(flowkit.transforms.WSPBiexTransform method)
(flowkit.transforms.WSPLogTransform method)
apply_compensation() (flowkit.Sample method)
apply_transform() (flowkit.Sample method)
args (flowkit.exceptions.FlowJoWSPParsingError attribute)
(flowkit.exceptions.FlowJoWSPParsingWarning attribute)
(flowkit.exceptions.FlowKitException attribute)
(flowkit.exceptions.FlowKitWarning attribute)
(flowkit.exceptions.GateReferenceError attribute)
(flowkit.exceptions.GateTreeError attribute)
(flowkit.exceptions.QuadrantReferenceError attribute)
as_dataframe() (flowkit.Matrix method)
(flowkit.Sample method)
AsinhTransform (class in flowkit.transforms)
B
BooleanGate (class in flowkit.gates)
C
clear_cache() (flowkit.GatingStrategy method)
D
Dimension (class in flowkit)
E
EllipsoidGate (class in flowkit.gates)
export() (flowkit.Sample method)
export_gate_hierarchy_image() (flowkit.GatingStrategy method)
export_gatingml() (in module flowkit)
export_gml() (flowkit.Session method)
export_wsp() (flowkit.Session method)
extract_wsp_sample_data() (in module flowkit)
F
filter_negative_scatter() (flowkit.Sample method)
find_matching_gate_paths() (flowkit.GatingStrategy method)
(flowkit.Session method)
(flowkit.Workspace method)
FlowJoWSPParsingError
FlowJoWSPParsingWarning
flowkit.exceptions
module
FlowKitException
FlowKitWarning
G
gate_sample() (flowkit.GatingStrategy method)
GateReferenceError
GateTreeError
GatingResults (class in flowkit._models.gating_strategy)
GatingStrategy (class in flowkit)
get_analysis_report() (flowkit.Session method)
(flowkit.Workspace method)
get_channel_events() (flowkit.Sample method)
get_channel_index() (flowkit.Sample method)
get_channel_number_by_label() (flowkit.Sample method)
get_child_gate_ids() (flowkit.GatingStrategy method)
(flowkit.Session method)
(flowkit.Workspace method)
get_comp_matrices() (flowkit.Session method)
get_comp_matrix() (flowkit.GatingStrategy method)
(flowkit.Session method)
(flowkit.Workspace method)
get_dimension() (flowkit.gates.BooleanGate method)
(flowkit.gates.EllipsoidGate method)
(flowkit.gates.PolygonGate method)
(flowkit.gates.QuadrantGate method)
(flowkit.gates.RectangleGate method)
get_dimension_ids() (flowkit.gates.BooleanGate method)
(flowkit.gates.EllipsoidGate method)
(flowkit.gates.PolygonGate method)
(flowkit.gates.QuadrantGate method)
(flowkit.gates.RectangleGate method)
get_divider_range() (flowkit.gates.Quadrant method)
get_events() (flowkit.Sample method)
get_gate() (flowkit.GatingStrategy method)
(flowkit.Session method)
(flowkit.Workspace method)
get_gate_absolute_percent() (flowkit._models.gating_strategy.GatingResults method)
get_gate_count() (flowkit._models.gating_strategy.GatingResults method)
get_gate_events() (flowkit.Session method)
(flowkit.Workspace method)
get_gate_hierarchy() (flowkit.GatingStrategy method)
(flowkit.Session method)
(flowkit.Workspace method)
get_gate_ids() (flowkit.GatingStrategy method)
(flowkit.Session method)
(flowkit.Workspace method)
get_gate_membership() (flowkit._models.gating_strategy.GatingResults method)
(flowkit.Session method)
(flowkit.Workspace method)
get_gate_relative_percent() (flowkit._models.gating_strategy.GatingResults method)
get_gating_results() (flowkit.Session method)
(flowkit.Workspace method)
get_gating_strategy() (flowkit.Workspace method)
get_index_sorted_locations() (flowkit.Sample method)
get_max_depth() (flowkit.GatingStrategy method)
get_metadata() (flowkit.Sample method)
get_parent_gate_id() (flowkit.GatingStrategy method)
get_root_gates() (flowkit.GatingStrategy method)
get_sample() (flowkit.Session method)
(flowkit.Workspace method)
get_sample_gates() (flowkit.Session method)
get_sample_groups() (flowkit.Workspace method)
get_sample_ids() (flowkit.Session method)
(flowkit.Workspace method)
get_samples() (flowkit.Workspace method)
get_transform() (flowkit.GatingStrategy method)
(flowkit.Session method)
(flowkit.Workspace method)
get_transforms() (flowkit.Session method)
(flowkit.Workspace method)
H
HyperlogTransform (class in flowkit.transforms)
I
inverse() (flowkit.Matrix method)
(flowkit.transforms.AsinhTransform method)
(flowkit.transforms.HyperlogTransform method)
(flowkit.transforms.LinearTransform method)
(flowkit.transforms.LogicleTransform method)
(flowkit.transforms.LogTransform method)
(flowkit.transforms.WSPBiexTransform method)
is_custom_gate() (flowkit.GatingStrategy method)
L
LinearTransform (class in flowkit.transforms)
load_samples() (in module flowkit)
LogicleTransform (class in flowkit.transforms)
LogTransform (class in flowkit.transforms)
M
Matrix (class in flowkit)
module
flowkit.exceptions
P
parse_gating_xml() (in module flowkit)
parse_wsp() (in module flowkit)
plot_channel() (flowkit.Sample method)
plot_contour() (flowkit.Sample method)
plot_gate() (flowkit.Session method)
(flowkit.Workspace method)
plot_histogram() (flowkit.Sample method)
plot_scatter() (flowkit.Sample method)
(flowkit.Session method)
(flowkit.Workspace method)
plot_scatter_matrix() (flowkit.Sample method)
PolygonGate (class in flowkit.gates)
Q
Quadrant (class in flowkit.gates)
QuadrantDivider (class in flowkit)
QuadrantGate (class in flowkit.gates)
QuadrantReferenceError
R
RatioDimension (class in flowkit)
RatioTransform (class in flowkit.transforms)
read_multi_dataset_fcs() (in module flowkit)
RectangleGate (class in flowkit.gates)
remove_gate() (flowkit.GatingStrategy method)
(flowkit.Session method)
resolver (flowkit.GatingStrategy attribute)
S
Sample (class in flowkit)
Session (class in flowkit)
set_flagged_events() (flowkit.Sample method)
subsample_events() (flowkit.Sample method)
summary() (flowkit.Workspace method)
W
with_traceback() (flowkit.exceptions.FlowJoWSPParsingError method)
(flowkit.exceptions.FlowJoWSPParsingWarning method)
(flowkit.exceptions.FlowKitException method)
(flowkit.exceptions.FlowKitWarning method)
(flowkit.exceptions.GateReferenceError method)
(flowkit.exceptions.GateTreeError method)
(flowkit.exceptions.QuadrantReferenceError method)
Workspace (class in flowkit)
WSPBiexTransform (class in flowkit.transforms)
WSPLogTransform (class in flowkit.transforms)
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