Tutorials

Basic Tutorial Series

• FlowKit Tutorial - Part 1 - The Sample Class
• FlowKit Tutorial - Part 2 - The transforms Module & Matrix Class
• FlowKit Tutorial - Part 3 - The GatingStrategy & GatingResults Classes
• FlowKit Tutorial - Part 4 - Programmatically creating a GatingStrategy using the gates Module
• FlowKit Tutorial - Part 5 - The Session Class
• FlowKit Tutorial - Part 6 - The Workspace Class

Advanced Examples

• Clustering Comparison: Leiden vs Louvain
• Dimension Reduction on Gated Populations
• Compare Mean Fluorescence Intensity of Gated Events
• Programmatically Replicate Gating from a FlowJo Workspace
• Boolean Combinations of Gates
• Saving Flow Analysis Data as AnnData objects for ScanPy
• Apply scanpy to AnnData object